RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g34100.1 View Network Show in Genome Browser |
| Other Names | Os04g0418000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20653686-20657286 Nucleotide Length: 696 |
| Protein-coding | LOC_Os04g34100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19890 LOC_Os01g41610 LOC_Os04g24520 LOC_Os02g11720 LOC_Os03g38520 LOC_Os03g59220 |
| Downstream Genes | LOC_Os07g39710 LOC_Os12g37419 LOC_Os08g44460 LOC_Os09g39550 LOC_Os07g31490 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g34100.1 |
| Rice Genome Annotation | LOC_Os04g34100.1 |
| Ricechip | LOC_Os04g34100.1 |
| KEGG | osa:4335816 dosa:Os04t0418000-01 |
| Entrez-Gene | 4335816 |