RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g34230.1 View Network Show in Genome Browser |
| Other Names | Os04g0419550 |
| Description | RING-H2 finger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20733300-20735940 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os04g34230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18870 LOC_Os02g45450 LOC_Os01g48300 LOC_Os04g02780 LOC_Os01g06500 LOC_Os01g72950 LOC_Os03g31490 LOC_Os02g02890 LOC_Os04g02754 LOC_Os02g53400 LOC_Os01g55360 More.. |
| Downstream Genes | LOC_Os06g24540 LOC_Os04g48350 LOC_Os06g44190 LOC_Os08g16130 LOC_Os05g03100 LOC_Os08g01920 LOC_Os04g58330 LOC_Os09g07900 LOC_Os10g13670 LOC_Os07g39310 LOC_Os12g24580 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g34230.1 |
| Rice Genome Annotation | LOC_Os04g34230.1 |
| Ricechip | LOC_Os04g34230.1 |
| KEGG | dosa:Os04t0419550-01 |