RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g34450.1 View Network Show in Genome Browser |
| Other Names | Os04g0421900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20862474-20872470 Nucleotide Length: 3306 |
| Protein-coding | LOC_Os04g34450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58970 LOC_Os03g27080 LOC_Os03g09100 LOC_Os02g51430 LOC_Os04g31900 LOC_Os01g69910 |
| Downstream Genes | LOC_Os07g10110 LOC_Os07g43030 LOC_Os10g22950 LOC_Os11g05880 LOC_Os07g30774 LOC_Os04g58880 LOC_Os07g38060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g34450.1 |
| Rice Genome Annotation | LOC_Os04g34450.1 |
| Ricechip | LOC_Os04g34450.1 |
| KEGG | osa:4335834 dosa:Os04t0421900-01 |
| Entrez-Gene | 4335834 |