RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g34460.1 View Network Show in Genome Browser |
| Other Names | Os04g0422000 |
| Description | PAP fibrillin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20873336-20876370 Nucleotide Length: 837 |
| Protein-coding | LOC_Os04g34460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g17940 LOC_Os03g56869 LOC_Os02g05890 LOC_Os01g59080 LOC_Os03g14040 LOC_Os03g59640 LOC_Os01g48690 LOC_Os03g34040 LOC_Os01g25600 LOC_Os02g55120 LOC_Os01g59090 More.. |
| Downstream Genes | LOC_Os07g28790 LOC_Os04g46610 LOC_Os08g42850 LOC_Os04g45490 LOC_Os06g49160 LOC_Os12g29570 LOC_Os05g33520 LOC_Os11g04490 LOC_Os05g22730 LOC_Os08g07060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g34460.1 |
| Rice Genome Annotation | LOC_Os04g34460.1 |
| Ricechip | LOC_Os04g34460.1 |
| KEGG | osa:4335835 dosa:Os04t0422000-01 |
| Entrez-Gene | 4335835 |