RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g35540.1 View Network Show in Genome Browser |
| Other Names | Os04g0435100 |
| Description | amino acid permease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 21629566-21632840 Nucleotide Length: 1593 |
| Protein-coding | LOC_Os04g35540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g45170 LOC_Os03g37984 LOC_Os02g47210 LOC_Os02g07760 LOC_Os01g27630 LOC_Os01g27390 LOC_Os03g56410 LOC_Os01g55830 LOC_Os01g27360 LOC_Os01g27340 LOC_Os01g27260 More.. |
| Downstream Genes | LOC_Os10g30090 LOC_Os12g42850 LOC_Os11g05690 LOC_Os04g50864 LOC_Os12g06060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g35540.1 |
| Rice Genome Annotation | LOC_Os04g35540.1 |
| Ricechip | LOC_Os04g35540.1 |
| KEGG | osa:4335899 dosa:Os04t0435100-01 |
| Entrez-Gene | 4335899 |