RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g35790.2 View Network Show in Genome Browser |
| Other Names | Os04g0438600 |
| Description | GLTP domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 21799199-21801947 Nucleotide Length: 591 |
| Protein-coding | LOC_Os04g35790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g28540 |
| Downstream Genes | LOC_Os06g32240 LOC_Os06g32160 LOC_Os06g31890 LOC_Os06g32020 LOC_Os06g31960 LOC_Os06g31930 LOC_Os06g31800 LOC_Os06g31280 LOC_Os06g32600 LOC_Os06g32550 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g35790.2 |
| Rice Genome Annotation | LOC_Os04g35790.2 |
| Ricechip | LOC_Os04g35790.2 |
| KEGG | osa:4335920 dosa:Os04t0438600-01 |
| Entrez-Gene | 4335920 |