RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g36740.1 View Network Show in Genome Browser |
| Other Names | Os04g0445000 |
| Description | potassium channel SKOR, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22192042-22197439 Nucleotide Length: 2169 |
| Protein-coding | LOC_Os04g36740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41670 LOC_Os02g41680 LOC_Os02g41650 LOC_Os02g19970 LOC_Os02g17970 LOC_Os02g41630 LOC_Os02g07490 LOC_Os02g15220 LOC_Os03g19410 LOC_Os02g01010 LOC_Os03g58810 More.. |
| Downstream Genes | LOC_Os05g35290 LOC_Os04g43800 LOC_Os09g26880 LOC_Os07g46370 LOC_Os06g19730 LOC_Os04g43760 LOC_Os06g08770 LOC_Os05g24550 LOC_Os10g34380 LOC_Os12g33610 LOC_Os11g48110 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529a |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g36740.1 |
| Rice Genome Annotation | LOC_Os04g36740.1 |
| Ricechip | LOC_Os04g36740.1 |
| KEGG | osa:4335955 dosa:Os04t0445000-01 |
| Entrez-Gene | 4335955 |