RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g37500.1 View Network Show in Genome Browser |
| Other Names | Os04g0447800 |
| Description | glutamate decarboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22330188-22332565 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os04g37500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26814 LOC_Os01g12800 LOC_Os04g01600 LOC_Os03g51980 LOC_Os02g02320 LOC_Os03g25440 LOC_Os01g71300 LOC_Os02g03100 LOC_Os03g52840 LOC_Os02g08480 LOC_Os01g42850 More.. |
| Downstream Genes | LOC_Os10g42250 LOC_Os08g44270 LOC_Os04g51520 LOC_Os10g11140 LOC_Os09g10820 LOC_Os07g25420 LOC_Os05g48840 LOC_Os09g38030 LOC_Os09g16910 LOC_Os06g25439 LOC_Os11g16410 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00250 rn00650 rn01100 rn00410 rn01110 rn00430 rn00770 |
| Metacyc Pathways | GLUDEG-I-PWY PWY-4321 PWY3O-210 PWY0-1305 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g37500.1 |
| Rice Genome Annotation | LOC_Os04g37500.1 |
| Ricechip | LOC_Os04g37500.1 |
| KEGG | osa:4335977 dosa:Os04t0447800-01 |
| Entrez-Gene | 4335977 |