RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g37580.1 View Network Show in Genome Browser |
| Other Names | Os04g0448600,Os04g0448550 |
| Description | cation transport regulator-like protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22354947-22357999 Nucleotide Length: 564 |
| Protein-coding | LOC_Os04g37580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g29230 LOC_Os04g37570 LOC_Os01g12470 LOC_Os01g57360 LOC_Os02g10510 LOC_Os03g21460 |
| Downstream Genes | LOC_Os08g43560 LOC_Os06g49520 LOC_Os06g41360 LOC_Os06g35050 LOC_Os08g09200 LOC_Os04g53370 LOC_Os09g34100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g37580.1 |
| Rice Genome Annotation | LOC_Os04g37580.1 |
| Ricechip | LOC_Os04g37580.1 |
| KEGG | osa:4335982 dosa:Os04t0448600-01dosa:Os04t0448550-00 |
| Entrez-Gene | 4335982 |