RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g37619.1 View Network Show in Genome Browser |
| Other Names | Os04g0448900 |
| Description | zeaxanthin epoxidase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22369632-22375538 Nucleotide Length: 1980 |
| Protein-coding | LOC_Os04g37619 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33050 LOC_Os03g51870 LOC_Os03g59530 LOC_Os01g68330 LOC_Os02g19150 LOC_Os01g61410 |
| Downstream Genes | LOC_Os11g07050 LOC_Os10g34580 LOC_Os08g41710 LOC_Os08g23680 LOC_Os07g09320 LOC_Os06g16430 LOC_Os09g04440 LOC_Os09g17620 LOC_Os11g17610 LOC_Os06g49040 LOC_Os12g02350 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00906 rn01100 rn01110 |
| Metacyc Pathways | PWY-1141 CAROTENOID-PWY |
| Reference | |
|---|---|
| PubMed | 17693452 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g37619.1 |
| Rice Genome Annotation | LOC_Os04g37619.1 |
| Ricechip | LOC_Os04g37619.1 |
| KEGG | osa:4335984 dosa:Os04t0448900-00 |
| Entrez-Gene | 4335984 |