RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g37904.2 View Network Show in Genome Browser |
| Other Names | Os04g0452000 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22534358-22541033 Nucleotide Length: 852 |
| Protein-coding | LOC_Os04g37904 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g26280 LOC_Os02g17910 LOC_Os01g43910 LOC_Os03g49750 LOC_Os04g30040 LOC_Os02g41500 LOC_Os02g40860 LOC_Os01g63280 LOC_Os04g12580 LOC_Os01g41730 LOC_Os01g51200 More.. |
| Downstream Genes | LOC_Os09g29510 LOC_Os10g33650 LOC_Os04g43730 LOC_Os12g38860 LOC_Os05g51560 LOC_Os10g09550 LOC_Os06g35530 LOC_Os10g01390 LOC_Os06g26340 LOC_Os06g22810 LOC_Os06g49170 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g37904.2 |
| Rice Genome Annotation | LOC_Os04g37904.2 |
| Ricechip | LOC_Os04g37904.2 |
| KEGG | dosa:Os04t0452000-01 |