RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38010.1 View Network Show in Genome Browser |
| Other Names | Os04g0453300,Os04g0453266 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22626439-22628157 Nucleotide Length: 1401 |
| Protein-coding | LOC_Os04g38010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39710 LOC_Os01g38670 LOC_Os02g14110 LOC_Os01g38680 LOC_Os01g08200 LOC_Os03g13760 LOC_Os02g01250 LOC_Os02g34510 LOC_Os01g42430 LOC_Os03g18410 LOC_Os02g06540 More.. |
| Downstream Genes | LOC_Os06g35540 LOC_Os11g42160 LOC_Os11g06890 LOC_Os05g01560 LOC_Os09g12590 LOC_Os05g46620 LOC_Os09g24924 LOC_Os08g08070 LOC_Os07g37320 LOC_Os10g41190 LOC_Os07g01560 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | ANAEROFRUCAT-PWY PWY-1042 PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38010.1 |
| Rice Genome Annotation | LOC_Os04g38010.1 |
| Ricechip | LOC_Os04g38010.1 |
| KEGG | dosa:Os04t0453300-00dosa:Os04t0453266-00 |