RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38220.1 View Network Show in Genome Browser |
| Other Names | Os04g0454200 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22744184-22748089 Nucleotide Length: 1554 |
| Protein-coding | LOC_Os04g38220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39710 LOC_Os01g38670 LOC_Os02g14110 LOC_Os01g38680 LOC_Os02g34510 LOC_Os01g42430 LOC_Os03g17700 LOC_Os02g07830 LOC_Os01g08200 LOC_Os02g06540 LOC_Os03g11900 More.. |
| Downstream Genes | LOC_Os06g21950 LOC_Os12g02370 LOC_Os06g35540 LOC_Os11g42160 LOC_Os11g06890 LOC_Os05g01560 LOC_Os10g16974 LOC_Os04g42490 LOC_Os06g06090 LOC_Os08g08070 LOC_Os07g37320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38220.1 |
| Rice Genome Annotation | LOC_Os04g38220.1 |
| Ricechip | LOC_Os04g38220.1 |
| KEGG | osa:4336017 dosa:Os04t0454200-01 |
| Entrez-Gene | 4336017 |