RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38310.3 View Network Show in Genome Browser |
| Other Names | Os04g0455600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22795145-22798775 Nucleotide Length: 678 |
| Protein-coding | LOC_Os04g38310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73980 LOC_Os01g67190 LOC_Os02g50820 LOC_Os03g55350 LOC_Os02g01560 LOC_Os02g47420 LOC_Os01g16890 LOC_Os02g48360 LOC_Os02g07870 LOC_Os01g02930 LOC_Os01g54870 More.. |
| Downstream Genes | LOC_Os05g32760 LOC_Os06g15620 LOC_Os10g25780 LOC_Os07g45060 LOC_Os10g40614 LOC_Os05g43690 LOC_Os06g34120 LOC_Os05g35480 LOC_Os06g09630 LOC_Os07g42950 LOC_Os12g38140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38310.3 |
| Rice Genome Annotation | LOC_Os04g38310.3 |
| Ricechip | LOC_Os04g38310.3 |
| KEGG | osa:4336021 dosa:Os04t0455600-02 |
| Entrez-Gene | 4336021 |