RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38330.1 View Network Show in Genome Browser |
| Other Names | Os04g0455800 |
| Description | radical SAM enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22802295-22806020 Nucleotide Length: 1149 |
| Protein-coding | LOC_Os04g38330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g20560 LOC_Os04g35480 LOC_Os03g10520 LOC_Os01g74190 LOC_Os01g45370 LOC_Os01g56560 LOC_Os02g15870 LOC_Os03g56390 LOC_Os04g02900 LOC_Os03g44300 LOC_Os02g45660 More.. |
| Downstream Genes | LOC_Os12g40450 LOC_Os04g40840 LOC_Os11g38030 LOC_Os12g17070 LOC_Os08g42730 LOC_Os12g32230 LOC_Os09g24320 LOC_Os08g33440 LOC_Os12g08170 LOC_Os08g42410 LOC_Os12g42230 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00785 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38330.1 |
| Rice Genome Annotation | LOC_Os04g38330.1 |
| Ricechip | LOC_Os04g38330.1 |
| KEGG | osa:4336023 dosa:Os04t0455800-01 |
| Entrez-Gene | 4336023 |