RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38390.1 View Network Show in Genome Browser |
| Other Names | Os04g0456700 |
| Description | wound/stress protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22829317-22830421 Nucleotide Length: 582 |
| Protein-coding | LOC_Os04g38390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56180 |
| Downstream Genes | LOC_Os08g17600 LOC_Os05g05680 LOC_Os05g05670 LOC_Os04g47970 LOC_Os06g06160 LOC_Os04g55410 LOC_Os06g51170 LOC_Os09g10274 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38390.1 |
| Rice Genome Annotation | LOC_Os04g38390.1 |
| Ricechip | LOC_Os04g38390.1 |
| KEGG | osa:4336027 dosa:Os04t0456700-01 |
| Entrez-Gene | 4336027 |