RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38530.1 View Network Show in Genome Browser |
| Other Names | Os04g0458300 |
| Description | aldose 1-epimerase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22893765-22898657 Nucleotide Length: 1143 |
| Protein-coding | LOC_Os04g38530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46950 LOC_Os03g53710 LOC_Os03g06230 LOC_Os03g61710 LOC_Os02g04840 |
| Downstream Genes | LOC_Os09g15820 LOC_Os04g56290 LOC_Os09g17630 LOC_Os06g48940 LOC_Os04g51880 LOC_Os05g49430 LOC_Os11g32260 LOC_Os06g13650 LOC_Os07g07550 LOC_Os08g28730 LOC_Os09g35800 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn01110 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38530.1 |
| Rice Genome Annotation | LOC_Os04g38530.1 |
| Ricechip | LOC_Os04g38530.1 |
| KEGG | osa:4336037 dosa:Os04t0458300-01 |
| Entrez-Gene | 4336037 |