RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38560.1 View Network Show in Genome Browser |
| Other Names | Os04g0458900 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22910389-22912423 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os04g38560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27190 |
| Downstream Genes | LOC_Os07g17310 LOC_Os11g43640 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn00500 rn01100 |
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38560.1 |
| Rice Genome Annotation | LOC_Os04g38560.1 |
| Ricechip | LOC_Os04g38560.1 |
| KEGG | osa:4336041 dosa:Os04t0458900-01 |
| Entrez-Gene | 4336041 |