RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38610.2 View Network Show in Genome Browser |
| Other Names | Os04g0459600 |
| Description | RAN guanine nucleotide release factor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22939140-22942394 Nucleotide Length: 609 |
| Protein-coding | LOC_Os04g38610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69920 LOC_Os03g18180 LOC_Os03g29470 LOC_Os02g55300 LOC_Os03g50860 LOC_Os03g25120 LOC_Os02g50480 LOC_Os04g35570 LOC_Os01g40570 LOC_Os02g06640 LOC_Os01g51770 More.. |
| Downstream Genes | LOC_Os05g49890 LOC_Os08g42000 LOC_Os08g33390 LOC_Os09g35790 LOC_Os08g43334 LOC_Os05g28290 LOC_Os04g53230 LOC_Os09g19734 LOC_Os08g10570 LOC_Os05g46270 LOC_Os05g46560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR440 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38610.2 |
| Rice Genome Annotation | LOC_Os04g38610.2 |
| Ricechip | LOC_Os04g38610.2 |
| KEGG | osa:4336045 dosa:Os04t0459600-01 |
| Entrez-Gene | 4336045 |