RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38630.1 View Network Show in Genome Browser |
| Other Names | Os04g0459800 |
| Description | helicase conserved C-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22947805-22951875 Nucleotide Length: 2205 |
| Protein-coding | LOC_Os04g38630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47140 LOC_Os02g28810 LOC_Os04g28180 LOC_Os01g25610 LOC_Os02g01560 LOC_Os02g58640 LOC_Os03g20750 |
| Downstream Genes | LOC_Os04g50990 LOC_Os07g41190 LOC_Os06g03780 LOC_Os07g36090 LOC_Os06g08800 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR415 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38630.1 |
| Rice Genome Annotation | LOC_Os04g38630.1 |
| Ricechip | LOC_Os04g38630.1 |
| KEGG | osa:4336047 dosa:Os04t0459800-01 |
| Entrez-Gene | 4336047 |