RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38660.1 View Network Show in Genome Browser |
| Other Names | Os04g0460200 |
| Description | transmembrane amino acid transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22969845-22970964 Nucleotide Length: 690 |
| Protein-coding | LOC_Os04g38660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09810 LOC_Os02g49510 LOC_Os03g08960 LOC_Os01g61044 LOC_Os01g48680 |
| Downstream Genes | LOC_Os10g23090 LOC_Os06g43700 LOC_Os06g42720 LOC_Os06g16420 |
| Reference | |
|---|---|
| PubMed | 21263038 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38660.1 |
| Rice Genome Annotation | LOC_Os04g38660.1 |
| Ricechip | LOC_Os04g38660.1 |
| KEGG | dosa:Os04t0460200-00 |