RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38700.1 View Network Show in Genome Browser |
| Other Names | Os04g0460500 |
| Description | molybdopterin biosynthesis protein CNX3, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 22983741-22989200 Nucleotide Length: 675 |
| Protein-coding | LOC_Os04g38700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04740 LOC_Os02g15870 LOC_Os02g35200 LOC_Os03g03450 LOC_Os02g13840 LOC_Os03g63370 |
| Downstream Genes | LOC_Os04g56620 LOC_Os12g32230 LOC_Os08g23150 LOC_Os09g08130 LOC_Os04g39270 LOC_Os05g07700 LOC_Os06g48510 LOC_Os07g46520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38700.1 |
| Rice Genome Annotation | LOC_Os04g38700.1 |
| Ricechip | LOC_Os04g38700.1 |
| KEGG | osa:4336051 dosa:Os04t0460500-00 |
| Entrez-Gene | 4336051 |