RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38870.1 View Network Show in Genome Browser |
| Other Names | Os04g0462500 |
| Description | 14-3-3 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 23104041-23107594 Nucleotide Length: 789 |
| Protein-coding | LOC_Os04g38870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g36974 LOC_Os03g50290 LOC_Os02g47150 LOC_Os03g20370 LOC_Os01g16240 LOC_Os04g38480 LOC_Os01g17190 LOC_Os02g49310 LOC_Os02g35010 LOC_Os01g54550 LOC_Os03g05760 More.. |
| Downstream Genes | LOC_Os08g33370 LOC_Os10g37660 LOC_Os11g10420 LOC_Os09g30150 LOC_Os06g18830 LOC_Os07g48780 LOC_Os05g41210 LOC_Os11g34450 LOC_Os08g07760 LOC_Os08g38320 LOC_Os06g14740 More.. |
| Reference | |
|---|---|
| PubMed | 16766513 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38870.1 |
| Rice Genome Annotation | LOC_Os04g38870.1 |
| Ricechip | LOC_Os04g38870.1 |
| KEGG | osa:4336066 dosa:Os04t0462500-01 |
| Entrez-Gene | 4336066 |