RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g38950.2 View Network Show in Genome Browser |
| Other Names | Os04g0463500 |
| Description | class I glutamine amidotransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 23139799-23142817 Nucleotide Length: 681 |
| Protein-coding | LOC_Os04g38950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15780 LOC_Os03g61120 LOC_Os03g03450 LOC_Os02g03850 LOC_Os03g15120 LOC_Os01g43020 LOC_Os02g50350 LOC_Os02g08270 LOC_Os03g07300 LOC_Os01g46570 LOC_Os01g73310 More.. |
| Downstream Genes | LOC_Os08g23150 LOC_Os04g39270 LOC_Os09g08130 LOC_Os06g48620 LOC_Os12g36950 LOC_Os09g19734 LOC_Os05g49770 LOC_Os05g01600 LOC_Os11g06390 LOC_Os11g20384 LOC_Os10g36650 More.. |
| Reference | |
|---|---|
| PubMed | 19682283 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g38950.2 |
| Rice Genome Annotation | LOC_Os04g38950.2 |
| Ricechip | LOC_Os04g38950.2 |
| KEGG | osa:4336076 dosa:Os04t0463500-01 |
| Entrez-Gene | 4336076 |