RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g39150.1 View Network Show in Genome Browser |
| Other Names | Os04g0465600 |
| Description | pathogenesis-related Bet v I family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 23278471-23279498 Nucleotide Length: 474 |
| Protein-coding | LOC_Os04g39150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15640 LOC_Os02g50620 |
| Downstream Genes | LOC_Os05g43830 LOC_Os11g34940 LOC_Os05g32140 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g39150.1 |
| Rice Genome Annotation | LOC_Os04g39150.1 |
| Ricechip | LOC_Os04g39150.1 |
| KEGG | osa:4336091 dosa:Os04t0465600-01 |
| Entrez-Gene | 4336091 |