RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g39440.1 View Network Show in Genome Browser
Other Names	Os04g0470100
Description	ras-related protein, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 23492935-23495366 Nucleotide Length: 648
Protein-coding	LOC_Os04g39440

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g53500 LOC_Os02g21970 LOC_Os02g12570 LOC_Os03g14260 LOC_Os01g56600 LOC_Os03g19350 LOC_Os02g07490 LOC_Os03g38020 LOC_Os03g16900
Downstream Genes	LOC_Os04g40290 LOC_Os05g34540 LOC_Os05g23860 LOC_Os10g31864 LOC_Os09g36300 LOC_Os07g48960 LOC_Os05g43390 LOC_Os07g16970 LOC_Os08g34010 LOC_Os06g45590

Database Links
Gramene	LOC_Os04g39440.1
Rice Genome Annotation	LOC_Os04g39440.1
Ricechip	LOC_Os04g39440.1
KEGG	osa:4336117 dosa:Os04t0470100-01
Entrez-Gene	4336117