RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g39650.1 View Network Show in Genome Browser |
| Other Names | Os04g0472500 |
| Description | receptor protein kinase CLAVATA1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 23626733-23629985 Nucleotide Length: 2757 |
| Protein-coding | LOC_Os04g39650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46600 LOC_Os02g11980 LOC_Os02g01800 LOC_Os02g11930 LOC_Os02g12030 LOC_Os02g12010 LOC_Os02g08364 LOC_Os02g12450 LOC_Os02g40180 LOC_Os01g05640 LOC_Os02g13780 More.. |
| Downstream Genes | LOC_Os08g09640 LOC_Os06g38730 LOC_Os06g38930 LOC_Os06g38670 LOC_Os08g09450 LOC_Os06g38650 LOC_Os06g38590 LOC_Os06g38780 LOC_Os06g38340 LOC_Os11g41100 LOC_Os11g36090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g39650.1 |
| Rice Genome Annotation | LOC_Os04g39650.1 |
| Ricechip | LOC_Os04g39650.1 |
| KEGG | osa:4336131 dosa:Os04t0472500-00 |
| Entrez-Gene | 4336131 |