RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g39864.1 View Network Show in Genome Browser |
| Other Names | Os04g0474700 |
| Description | Os4bglu11 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 23735317-23742382 Nucleotide Length: 1635 |
| Protein-coding | LOC_Os04g39864 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08750 |
| Downstream Genes | LOC_Os11g29200 LOC_Os12g24250 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166l-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 rn01110 rn00460 rn00940 |
| Metacyc Pathways | PWY-5176 PWY-4441 PWY-3121 PWY-6002 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g39864.1 |
| Rice Genome Annotation | LOC_Os04g39864.1 |
| Ricechip | LOC_Os04g39864.1 |
| KEGG | dosa:Os04t0474700-01 |