RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g39880.1 View Network Show in Genome Browser |
| Other Names | Os04g0474800 |
| Description | Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 23747525-23752767 Nucleotide Length: 1533 |
| Protein-coding | LOC_Os04g39880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08750 |
| Downstream Genes | LOC_Os11g29200 LOC_Os12g24250 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 rn01110 rn00460 rn00940 |
| Metacyc Pathways | PWY-5176 PWY-4441 PWY-3121 PWY-6002 |
| Reference | |
|---|---|
| PubMed | 17196101 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g39880.1 |
| Rice Genome Annotation | LOC_Os04g39880.1 |
| Ricechip | LOC_Os04g39880.1 |
| KEGG | osa:4336145 dosa:Os04t0474800-02 |
| Entrez-Gene | 4336145 |