RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g40600.1 View Network Show in Genome Browser |
| Other Names | Os04g0482000 |
| Description | peptide methionine sulfoxide reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24102870-24104925 Nucleotide Length: 564 |
| Protein-coding | LOC_Os04g40600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58630 LOC_Os01g08770 LOC_Os03g53230 LOC_Os03g14990 LOC_Os04g02050 |
| Downstream Genes | LOC_Os12g42876 LOC_Os12g42884 LOC_Os05g35740 LOC_Os07g08840 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g40600.1 |
| Rice Genome Annotation | LOC_Os04g40600.1 |
| Ricechip | LOC_Os04g40600.1 |
| KEGG | osa:4336192 dosa:Os04t0482000-01 |
| Entrez-Gene | 4336192 |