RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g40660.1 View Network Show in Genome Browser |
| Other Names | Os04g0482800 |
| Description | MA3 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24133854-24138557 Nucleotide Length: 1989 |
| Protein-coding | LOC_Os04g40660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05330 LOC_Os01g67134 |
| Downstream Genes | LOC_Os06g48750 LOC_Os07g36940 LOC_Os12g15420 LOC_Os05g05450 LOC_Os08g02410 LOC_Os08g02400 LOC_Os11g05394 LOC_Os08g02340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5155 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g40660.1 |
| Rice Genome Annotation | LOC_Os04g40660.1 |
| Ricechip | LOC_Os04g40660.1 |
| KEGG | osa:4336196 dosa:Os04t0482800-01 |
| Entrez-Gene | 4336196 |