RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g40730.1 View Network Show in Genome Browser |
| Other Names | Os04g0483500 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24175619-24178976 Nucleotide Length: 957 |
| Protein-coding | LOC_Os04g40730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32070 LOC_Os01g05670 LOC_Os03g14170 LOC_Os03g53360 LOC_Os01g05840 LOC_Os03g12030 LOC_Os03g58630 LOC_Os04g22380 LOC_Os04g22390 LOC_Os01g15770 LOC_Os01g42430 More.. |
| Downstream Genes | LOC_Os07g23169 LOC_Os11g07930 LOC_Os11g07922 LOC_Os04g52400 LOC_Os12g41590 LOC_Os07g08840 LOC_Os09g39670 LOC_Os10g40030 LOC_Os10g40020 LOC_Os05g28520 LOC_Os07g40890 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g40730.1 |
| Rice Genome Annotation | LOC_Os04g40730.1 |
| Ricechip | LOC_Os04g40730.1 |
| KEGG | osa:4336202 dosa:Os04t0483500-01 |
| Entrez-Gene | 4336202 |