RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g41130.1 View Network Show in Genome Browser |
| Other Names | Os04g0488400 |
| Description | osFTL6 FT-Like6 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24391002-24395755 Nucleotide Length: 525 |
| Protein-coding | LOC_Os04g41130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51080 LOC_Os04g01600 LOC_Os03g13300 LOC_Os01g71300 LOC_Os04g37460 LOC_Os03g17700 LOC_Os01g62870 LOC_Os01g32660 LOC_Os03g02680 LOC_Os01g12800 LOC_Os04g37500 More.. |
| Downstream Genes | LOC_Os08g36320 LOC_Os05g25310 LOC_Os11g17610 LOC_Os10g37660 LOC_Os06g06090 LOC_Os10g11140 LOC_Os06g46770 LOC_Os05g42424 LOC_Os12g12860 LOC_Os07g44710 LOC_Os09g38030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g41130.1 |
| Rice Genome Annotation | LOC_Os04g41130.1 |
| Ricechip | LOC_Os04g41130.1 |
| KEGG | osa:4336228 dosa:Os04t0488400-01 |
| Entrez-Gene | 4336228 |