RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g41460.1 View Network Show in Genome Browser |
| Other Names | Os04g0491700 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24567103-24571704 Nucleotide Length: 1521 |
| Protein-coding | LOC_Os04g41460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g22710 LOC_Os01g16260 LOC_Os01g17214 LOC_Os01g10240 LOC_Os01g70740 LOC_Os03g09250 LOC_Os03g17990 LOC_Os03g17700 |
| Downstream Genes | LOC_Os04g45810 LOC_Os07g37510 LOC_Os04g53930 LOC_Os07g37530 LOC_Os12g03860 LOC_Os11g05390 LOC_Os11g04030 LOC_Os10g22450 LOC_Os11g04020 LOC_Os11g04104 LOC_Os12g03899 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2091-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g41460.1 |
| Rice Genome Annotation | LOC_Os04g41460.1 |
| Ricechip | LOC_Os04g41460.1 |
| KEGG | osa:4336250 dosa:Os04t0491700-01 |
| Entrez-Gene | 4336250 |