RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g41470.1 View Network Show in Genome Browser |
| Other Names | Os04g0492100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24581515-24588736 Nucleotide Length: 1770 |
| Protein-coding | LOC_Os04g41470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g50430 LOC_Os02g10920 LOC_Os01g59980 LOC_Os01g07070 LOC_Os01g18100 LOC_Os02g17470 LOC_Os02g07070 LOC_Os02g09060 LOC_Os03g19059 LOC_Os03g05570 LOC_Os02g47870 More.. |
| Downstream Genes | LOC_Os10g30070 LOC_Os09g12800 LOC_Os08g41010 LOC_Os12g22620 LOC_Os07g22024 LOC_Os04g50870 LOC_Os06g09170 LOC_Os07g06980 LOC_Os04g55480 LOC_Os06g19680 LOC_Os07g22840 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1428a-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g41470.1 |
| Rice Genome Annotation | LOC_Os04g41470.1 |
| Ricechip | LOC_Os04g41470.1 |
| KEGG | osa:4336253 dosa:Os04t0492100-01 |
| Entrez-Gene | 4336253 |