RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g41510.1 View Network Show in Genome Browser
Other Names	Os04g0492500,Os04g0492600
Description	serine/threonine-protein kinase GCN2, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 24615554-24624651 Nucleotide Length: 2631
Protein-coding	LOC_Os04g41510

Gene Ontology Classification
GO	Name	Type	Code
GO:0006464	protein modification process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g35760 LOC_Os02g05630 LOC_Os02g15594 LOC_Os01g01410 LOC_Os04g37904 LOC_Os04g31270 LOC_Os02g55560 LOC_Os02g30800 LOC_Os01g37837 LOC_Os03g10190 LOC_Os03g07300 More..
Downstream Genes	LOC_Os04g50720 LOC_Os04g41530 LOC_Os09g33860 LOC_Os10g02970 LOC_Os06g33549 LOC_Os04g56450 LOC_Os06g48300 LOC_Os07g32380 LOC_Os06g44210 LOC_Os11g08330 LOC_Os06g33530 More..

Pathways
KEGG Pathways	rn00970
Metacyc Pathways	TRNA-CHARGING-PWY

Database Links
Gramene	LOC_Os04g41510.1
Rice Genome Annotation	LOC_Os04g41510.1
Ricechip	LOC_Os04g41510.1
KEGG	osa:4336256 osa:4336257 dosa:Os04t0492500-01 dosa:Os04t0492600-01
Entrez-Gene	4336256