RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g41560.4 View Network Show in Genome Browser |
| Other Names | Os04g0493000 |
| Description | B-box zinc finger family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24647901-24649396 Nucleotide Length: 546 |
| Protein-coding | LOC_Os04g41560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63770 |
| Downstream Genes | LOC_Os10g42710 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g41560.4 |
| Rice Genome Annotation | LOC_Os04g41560.4 |
| Ricechip | LOC_Os04g41560.4 |
| KEGG | osa:4336260 dosa:Os04t0493000-01 |
| Entrez-Gene | 4336260 |