RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g41910.1 View Network Show in Genome Browser |
| Other Names | Os04g0496400 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24834401-24839784 Nucleotide Length: 1431 |
| Protein-coding | LOC_Os04g41910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15700 LOC_Os02g39700 LOC_Os02g05310 LOC_Os01g56550 LOC_Os02g05410 LOC_Os02g27790 LOC_Os03g18720 LOC_Os02g04950 LOC_Os02g04480 LOC_Os04g37690 LOC_Os03g63730 More.. |
| Downstream Genes | LOC_Os04g42010 LOC_Os09g36920 LOC_Os05g43450 LOC_Os08g06344 LOC_Os10g02630 LOC_Os07g07220 LOC_Os05g05860 LOC_Os07g43060 LOC_Os08g05810 LOC_Os06g10620 LOC_Os11g36030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g41910.1 |
| Rice Genome Annotation | LOC_Os04g41910.1 |
| Ricechip | LOC_Os04g41910.1 |
| KEGG | osa:4336279 dosa:Os04t0496400-01 |
| Entrez-Gene | 4336279 |