RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g41960.1 View Network Show in Genome Browser |
| Other Names | Os04g0497000 |
| Description | NADP-dependent oxidoreductase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24858040-24859661 Nucleotide Length: 1038 |
| Protein-coding | LOC_Os04g41960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21460 LOC_Os03g04240 LOC_Os04g38450 LOC_Os03g04250 LOC_Os01g72280 LOC_Os02g09490 LOC_Os03g24060 LOC_Os01g54940 LOC_Os03g08999 LOC_Os02g55980 LOC_Os01g62870 More.. |
| Downstream Genes | LOC_Os07g44430 LOC_Os05g31770 LOC_Os07g44440 LOC_Os10g29470 LOC_Os09g23540 LOC_Os08g43190 LOC_Os10g42250 LOC_Os11g01154 LOC_Os12g01160 LOC_Os08g01760 LOC_Os10g07229 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g41960.1 |
| Rice Genome Annotation | LOC_Os04g41960.1 |
| Ricechip | LOC_Os04g41960.1 |
| KEGG | osa:4336283 dosa:Os04t0497000-01 |
| Entrez-Gene | 4336283 |