RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42010.1 View Network Show in Genome Browser |
| Other Names | Os04g0497600 |
| Description | RNA binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24882776-24886711 Nucleotide Length: 1308 |
| Protein-coding | LOC_Os04g42010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22740 LOC_Os03g22730 LOC_Os02g49270 LOC_Os03g22880 LOC_Os03g22350 LOC_Os03g58720 LOC_Os03g25450 LOC_Os03g60930 LOC_Os01g27730 LOC_Os02g57590 LOC_Os03g10340 More.. |
| Downstream Genes | LOC_Os09g37860 LOC_Os08g31810 LOC_Os07g44190 LOC_Os10g39820 LOC_Os11g01420 LOC_Os12g01430 LOC_Os10g10434 LOC_Os05g49150 LOC_Os04g52960 LOC_Os08g32090 LOC_Os08g23730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42010.1 |
| Rice Genome Annotation | LOC_Os04g42010.1 |
| Ricechip | LOC_Os04g42010.1 |
| KEGG | osa:4336287 dosa:Os04t0497600-01 |
| Entrez-Gene | 4336287 |