RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42290.1 View Network Show in Genome Browser |
| Other Names | Os04g0501200 |
| Description | methyladenine glycosylase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25017214-25020556 Nucleotide Length: 1152 |
| Protein-coding | LOC_Os04g42290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11900 LOC_Os02g34750 LOC_Os02g18640 LOC_Os01g40820 LOC_Os02g54000 LOC_Os03g64200 LOC_Os02g50320 LOC_Os03g21914 |
| Downstream Genes | LOC_Os12g10850 LOC_Os05g50290 LOC_Os06g13070 LOC_Os11g16580 LOC_Os07g38060 LOC_Os07g44430 LOC_Os09g02810 LOC_Os06g01400 LOC_Os11g45590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42290.1 |
| Rice Genome Annotation | LOC_Os04g42290.1 |
| Ricechip | LOC_Os04g42290.1 |
| KEGG | osa:4336309 dosa:Os04t0501200-01 |
| Entrez-Gene | 4336309 |