RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42320.1 View Network Show in Genome Browser |
| Other Names | Os04g0501600 |
| Description | AT hook motif family protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25038921-25045802 Nucleotide Length: 2541 |
| Protein-coding | LOC_Os04g42320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11200 LOC_Os01g64560 LOC_Os03g05690 LOC_Os01g54100 LOC_Os02g02290 LOC_Os04g34720 LOC_Os01g23590 LOC_Os01g51154 LOC_Os03g26960 LOC_Os04g25550 |
| Downstream Genes | LOC_Os08g12430 LOC_Os05g38810 LOC_Os04g54500 LOC_Os05g09620 LOC_Os06g24594 LOC_Os08g08000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42320.1 |
| Rice Genome Annotation | LOC_Os04g42320.1 |
| Ricechip | LOC_Os04g42320.1 |
| KEGG | osa:4336311 dosa:Os04t0501600-01 |
| Entrez-Gene | 4336311 |