RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42330.2 View Network Show in Genome Browser |
| Other Names | Os04g0501700 |
| Description | Spc97 / Spc98 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25048428-25054483 Nucleotide Length: 2121 |
| Protein-coding | LOC_Os04g42330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60040 LOC_Os01g67300 LOC_Os02g14860 LOC_Os03g25260 LOC_Os02g21260 LOC_Os03g09820 |
| Downstream Genes | LOC_Os09g27370 LOC_Os05g06450 LOC_Os06g51400 LOC_Os08g07760 LOC_Os09g36440 LOC_Os05g43374 LOC_Os07g40750 LOC_Os05g47480 LOC_Os06g05250 LOC_Os11g36390 LOC_Os07g06970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42330.2 |
| Rice Genome Annotation | LOC_Os04g42330.2 |
| Ricechip | LOC_Os04g42330.2 |
| KEGG | osa:4336312 dosa:Os04t0501700-01 |
| Entrez-Gene | 4336312 |