RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42340.1 View Network Show in Genome Browser |
| Other Names | Os04g0501800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25056662-25058971 Nucleotide Length: 591 |
| Protein-coding | LOC_Os04g42340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11340 LOC_Os02g44654 LOC_Os04g23180 |
| Downstream Genes | LOC_Os09g39680 LOC_Os12g40890 LOC_Os07g43390 LOC_Os04g47250 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42340.1 |
| Rice Genome Annotation | LOC_Os04g42340.1 |
| Ricechip | LOC_Os04g42340.1 |
| KEGG | osa:4336313 dosa:Os04t0501800-00 |
| Entrez-Gene | 4336313 |