RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42370.1 View Network Show in Genome Browser |
| Other Names | Os04g0502200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25067634-25075339 Nucleotide Length: 3564 |
| Protein-coding | LOC_Os04g42370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49050 LOC_Os03g15540 LOC_Os01g66110 LOC_Os03g50300 LOC_Os01g32800 LOC_Os02g35640 LOC_Os03g03830 LOC_Os02g50550 LOC_Os02g22090 LOC_Os03g05812 LOC_Os03g02270 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os09g04110 LOC_Os06g38550 LOC_Os08g29669 LOC_Os07g48780 LOC_Os06g50860 LOC_Os05g24601 LOC_Os05g06280 LOC_Os12g13590 LOC_Os06g05180 LOC_Os06g07090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42370.1 |
| Rice Genome Annotation | LOC_Os04g42370.1 |
| Ricechip | LOC_Os04g42370.1 |
| KEGG | osa:4336316 dosa:Os04t0502200-01 |
| Entrez-Gene | 4336316 |