RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42500.1 View Network Show in Genome Browser |
| Other Names | Os04g0503800 |
| Description | trafficking protein particle complex subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25150360-25152873 Nucleotide Length: 663 |
| Protein-coding | LOC_Os04g42500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g28400 LOC_Os01g51220 LOC_Os01g37800 LOC_Os01g54580 LOC_Os01g39310 LOC_Os03g51600 LOC_Os01g55040 LOC_Os02g52920 LOC_Os01g60120 LOC_Os03g12710 LOC_Os02g51150 More.. |
| Downstream Genes | LOC_Os07g44790 LOC_Os09g06970 LOC_Os07g19060 LOC_Os07g27150 LOC_Os06g05804 LOC_Os05g02530 LOC_Os12g10560 LOC_Os07g05580 LOC_Os07g12650 LOC_Os07g09600 LOC_Os06g12630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42500.1 |
| Rice Genome Annotation | LOC_Os04g42500.1 |
| Ricechip | LOC_Os04g42500.1 |
| KEGG | osa:4336326 dosa:Os04t0503800-01 |
| Entrez-Gene | 4336326 |