RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42540.1 View Network Show in Genome Browser |
| Other Names | Os04g0504200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25174777-25175746 Nucleotide Length: 561 |
| Protein-coding | LOC_Os04g42540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70560 LOC_Os03g03630 LOC_Os01g67110 LOC_Os03g56070 LOC_Os04g41900 LOC_Os04g38310 |
| Downstream Genes | LOC_Os07g44650 LOC_Os10g34030 LOC_Os11g48020 LOC_Os06g17490 LOC_Os10g28230 LOC_Os08g44420 LOC_Os08g44410 LOC_Os05g44310 LOC_Os04g57420 LOC_Os12g38140 LOC_Os11g37100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42540.1 |
| Rice Genome Annotation | LOC_Os04g42540.1 |
| Ricechip | LOC_Os04g42540.1 |
| KEGG | osa:4336328 dosa:Os04t0504200-01 |
| Entrez-Gene | 4336328 |