RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42600.2 View Network Show in Genome Browser |
| Other Names | Os04g0504800 |
| Description | polyadenylate-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25194790-25201272 Nucleotide Length: 1980 |
| Protein-coding | LOC_Os04g42600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16920 LOC_Os01g62290 LOC_Os03g60620 LOC_Os02g02410 LOC_Os03g16860 LOC_Os03g42220 LOC_Os01g67134 LOC_Os02g05330 LOC_Os03g08440 LOC_Os01g73880 LOC_Os03g10340 More.. |
| Downstream Genes | LOC_Os05g38530 LOC_Os11g47760 LOC_Os10g41960 LOC_Os06g48750 LOC_Os11g06750 LOC_Os07g36940 LOC_Os12g07010 LOC_Os05g30530 LOC_Os07g08330 LOC_Os07g42450 LOC_Os08g42910 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42600.2 |
| Rice Genome Annotation | LOC_Os04g42600.2 |
| Ricechip | LOC_Os04g42600.2 |
| KEGG | osa:4336331 dosa:Os04t0504800-01 |
| Entrez-Gene | 4336331 |