RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42690.1 View Network Show in Genome Browser |
| Other Names | Os04g0506000 |
| Description | UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25251409-25253149 Nucleotide Length: 1458 |
| Protein-coding | LOC_Os04g42690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40030 LOC_Os02g36190 LOC_Os02g32770 LOC_Os01g50490 LOC_Os02g36150 LOC_Os02g35450 LOC_Os01g39630 LOC_Os04g27020 LOC_Os02g32814 LOC_Os02g29960 LOC_Os02g10290 More.. |
| Downstream Genes | LOC_Os10g16974 LOC_Os09g26940 LOC_Os09g08990 LOC_Os09g26960 LOC_Os08g10480 LOC_Os09g26980 LOC_Os08g35510 LOC_Os04g48410 LOC_Os10g30410 LOC_Os10g30380 LOC_Os10g30390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00908 |
| Metacyc Pathways | PWY-2902 PWY-2881 PWY-2901 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42690.1 |
| Rice Genome Annotation | LOC_Os04g42690.1 |
| Ricechip | LOC_Os04g42690.1 |
| KEGG | osa:4336340 dosa:Os04t0506000-01 |
| Entrez-Gene | 4336340 |