RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42870.1 View Network Show in Genome Browser |
| Other Names | Os04g0507800 |
| Description | methyltransferase domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25372496-25374580 Nucleotide Length: 483 |
| Protein-coding | LOC_Os04g42870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56200 LOC_Os02g57160 LOC_Os02g36570 LOC_Os02g10430 LOC_Os03g29730 LOC_Os01g67730 LOC_Os01g67720 LOC_Os02g46750 LOC_Os02g38820 LOC_Os03g48040 LOC_Os01g47350 More.. |
| Downstream Genes | LOC_Os07g37180 LOC_Os04g56510 LOC_Os07g27480 LOC_Os04g54790 LOC_Os11g11000 LOC_Os07g12530 LOC_Os05g25840 LOC_Os11g34750 LOC_Os11g34830 LOC_Os09g07660 LOC_Os10g10170 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42870.1 |
| Rice Genome Annotation | LOC_Os04g42870.1 |
| Ricechip | LOC_Os04g42870.1 |
| KEGG | osa:9270356 dosa:Os04t0507800-01 |
| Entrez-Gene | 9270356 |